PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020694684.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NAC | ||||||||
Protein Properties | Length: 311aa MW: 35992.3 Da PI: 5.6246 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 175.7 | 1.3e-54 | 7 | 134 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdee++++yL +k+ ++++ +i+e++ +++ePwdLp+k+k +ekew+fF+++d+ky+tg r+nrat+sgyWkatgkdke+++ XP_020694684.1 7 LPPGFRFHPTDEEIITHYLSEKIIDQSFCP-IAIAEANFNDCEPWDLPSKAKMGEKEWFFFCQKDRKYPTGMRTNRATESGYWKATGKDKEIYKG 100 79************************9666.68***************99999****************************************** PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 kg lvg+kktLvfy grap+g+k++Wvmheyrle XP_020694684.1 101 KGVLVGMKKTLVFYIGRAPRGQKSNWVMHEYRLE 134 ********************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 311 aa Download sequence |
MDESLYLPPG FRFHPTDEEI ITHYLSEKII DQSFCPIAIA EANFNDCEPW DLPSKAKMGE 60 KEWFFFCQKD RKYPTGMRTN RATESGYWKA TGKDKEIYKG KGVLVGMKKT LVFYIGRAPR 120 GQKSNWVMHE YRLEGKHQQH FNLYKSGRQD EWVVYKVYHK AKDTKMIPAQ DLATSMNSFV 180 DDFLVETPYL PSLMDSSFNS RNKEILEPKE VQIDQQSTQS IYFSQRNTQG PFFFHHEEEI 240 MRDSSISNQN LNAFNGHVKI EQSSNSIASA EDCSAVSKYQ ISSVEMQDYV DDPSSSLQAL 300 DFDSLLNYGF V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18270.2 | 5e-94 | NAC family protein |