PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020694474.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 205aa MW: 21740.4 Da PI: 9.6538 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62 | 1.3e-19 | 26 | 76 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr ++ +gr++AeIrdp gk++r++lg+f++ae+Aa+a++ a+++l+g XP_020694474.1 26 TRFRGVRKRP-WGRFAAEIRDP---GKKTRVWLGTFDSAEDAARAYDTAARALRG 76 589*******.**********8...557*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MASRKGRTQA AALPAAAPPL PPGMETRFRG VRKRPWGRFA AEIRDPGKKT RVWLGTFDSA 60 EDAARAYDTA ARALRGPKAK TNFSAIPSHA STLGGGSGSG SVPLSFFHQQ LPPPARPATS 120 SLSSTVESFS GPRLSVPPAI YLRQLVQPAP PRVLDGDQDC HSDCGSSSSV VDDGDIASAY 180 RQPFPFDLNL LPPPDDELQS TALHL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20310.1 | 3e-23 | ERF family protein |