PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020694424.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 376aa    MW: 41253.3 Da    PI: 6.6997
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020694424.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.2e-19184234256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r r +lg+f+tae+Aa a+++ + +l+ge
  XP_020694424.1 184 LYRGVRQRH-WGKWVAEIRLPKN---RNRLWLGTFDTAEDAALAYDREAFRLRGE 234
                     59******9.**********976...48*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    
MEETRKGDGK FPSEAQGDEK RKQKGKGLKL DTPAGRPVEF ETPSMPFFEE ARAAALRPLK  60
KIRSPGRFSS NPSSPSTPAP ATASLPLPIF PFAYEASHPS SMASSLLPLN QQKMISFAQN  120
QFSSTPPPSS LFLTEGLQQR YTEQLLKYWS DSLNLSPRGN MMMTSLLEGR GSSPASLSRP  180
PAKLYRGVRQ RHWGKWVAEI RLPKNRNRLW LGTFDTAEDA ALAYDREAFR LRGENARLNF  240
PHLFLGKSTK EVTSSSSTPQ LPETKVEVLD NREQSSEVAA VEQSSLGTEL VWSEAEEAWF  300
NTWGPGSSVW DDVDGAGGSL LFHSPLDPVS EAQTDCSAAP KTPPPPPLMA TGSEEMESSS  360
SASQSFPSSM FMSKHP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.12e-47ERF family protein