PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020694342.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family GRAS
Protein Properties Length: 538aa    MW: 60166.1 Da    PI: 6.3118
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020694342.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS446.61.7e-1361695372373
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++ L++cA+av+++dl +a+ l+++l++++s +g+p+qRl ay++e+L arla++++++ykal+++e +   sse l+++++++ev+P++kf+++
  XP_020694342.1 169 KKGLIACARAVEDDDLMMAELLMTELRQMVSVSGEPIQRLGAYLLEGLIARLASTGTSIYKALKCKEPT---SSELLSYMHILYEVCPYFKFGYF 260
                     6789****************************************************************9...9********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                      aN aI ea++ge++vHiiDf+i qG QW++L+qaLa+Rp+gpp++RiTg++++ s+  + + l+ +g+rL+ +A++++vpfef++ +    +++
  XP_020694342.1 261 SANGAIAEALKGENAVHIIDFQIAQGSQWISLIQALAARPGGPPRVRITGIDDSISEyaRGTGLHLVGQRLSCLAQSCNVPFEFHA-APLPGDKI 354
                     *****************************************************87778899*************************.899***** PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     ++e+L v+pgEalaVn+++qlh+++desvs+e++rd++L++vkslsPkvv++veqe+++n+++F+ rfle+l+yy+a+f+s++a lpr+++eri+
  XP_020694342.1 355 HVEHLFVHPGEALAVNFAYQLHHMPDESVSTENHRDRILRMVKSLSPKVVTLVEQESNTNTAPFFPRFLETLDYYTAIFESIDAVLPRDHKERIS 449
                     *********************************************************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     vE+++l+r+ivnv+acegaer+erhe l+kW++r+++aGF+p+pls ++++++k+ll+++  + y++e+++g+l+lgWk+r L + +aW
  XP_020694342.1 450 VEQHCLARDIVNVIACEGAERVERHELLGKWKSRFRMAGFTPYPLSPFVNATIKSLLENYC-EHYKLEDRDGALYLGWKNRVLSVSCAW 537
                     ************************************************************9.55************************* PP

Sequence ? help Back to Top
Protein Sequence    Length: 538 aa     Download sequence    
MSMQASKKYK NFDKSQQFYM NSSNSARESE SHYPPQKHQF VNHLCSNDTS GSRNSPHQAS  60
DIHYCTLESS SVAGSYGIRQ SPSISLSSTT GSSVSLHDSL SESTYGSPAS VSCLTEDPND  120
LKHKMRELET AMLGSEMDNG DSFETTFDRQ LFLEPDKWKL LEIARGDLKK GLIACARAVE  180
DDDLMMAELL MTELRQMVSV SGEPIQRLGA YLLEGLIARL ASTGTSIYKA LKCKEPTSSE  240
LLSYMHILYE VCPYFKFGYF SANGAIAEAL KGENAVHIID FQIAQGSQWI SLIQALAARP  300
GGPPRVRITG IDDSISEYAR GTGLHLVGQR LSCLAQSCNV PFEFHAAPLP GDKIHVEHLF  360
VHPGEALAVN FAYQLHHMPD ESVSTENHRD RILRMVKSLS PKVVTLVEQE SNTNTAPFFP  420
RFLETLDYYT AIFESIDAVL PRDHKERISV EQHCLARDIV NVIACEGAER VERHELLGKW  480
KSRFRMAGFT PYPLSPFVNA TIKSLLENYC EHYKLEDRDG ALYLGWKNRV LSVSCAWI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein