PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020694092.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

bHLH

Protein Properties

Length: 471aa MW: 51720.1 Da PI: 6.6572

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020694092.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	53.6	4.1e-17	157	206	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f+ Lr llP++ ++K +Ka+ L +++eYI+ Lq XP_020694092.1 157 RSKHSATEQRRRSKINDRFQILRGLLPNS----DQKRDKASFLLEVIEYIQFLQ 206 889***********************9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MLKPLETADD EKTHKGPTQR TTHVLPGGIG TYSISHVSSG ASSFAVVKPE SNTCGPDAAY 60 AFPVWDAAKE PRPTTGQWPS TFAALSPPSF GSLASSRNSE FPDKKQRFME SASRFSKGFE 120 EDDDDDEEFG KRESSSHKDL TVKIDGKTGE QKACTPRSKH SATEQRRRSK INDRFQILRG 180 LLPNSDQKRD KASFLLEVIE YIQFLQERLQ KYESMYPGWS DETAKLMPWV KVYFRSFWKN 240 SRNNHHGSGD GMIDPQVLKN GASSGLLMSD SSIPVAPSIL SSSQNPTESD LIAGVSYKEL 300 ENPNGFSNKV AASPASLQPN LYPSIGRGTG DVSHPQQRLI PETVFTGSQS EWLRSSFPTG 360 CNVSNDEINA QELTIDEGTI SVSSEYSQGL LNTLSQALQN SGIDLSQASI SVHINLGRRA 420 SVSRRNASSM AAPKEQDEPL SSNLVMNSTR SGNRSDESEQ ATKKHKLDHH N

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MLKPLETADD EKTHKGPTQR TTHVLPGGIG TYSISHVSSG ASSFAVVKPE SNTCGPDAAY  60
AFPVWDAAKE PRPTTGQWPS TFAALSPPSF GSLASSRNSE FPDKKQRFME SASRFSKGFE  120
EDDDDDEEFG KRESSSHKDL TVKIDGKTGE QKACTPRSKH SATEQRRRSK INDRFQILRG  180
LLPNSDQKRD KASFLLEVIE YIQFLQERLQ KYESMYPGWS DETAKLMPWV KVYFRSFWKN  240
SRNNHHGSGD GMIDPQVLKN GASSGLLMSD SSIPVAPSIL SSSQNPTESD LIAGVSYKEL  300
ENPNGFSNKV AASPASLQPN LYPSIGRGTG DVSHPQQRLI PETVFTGSQS EWLRSSFPTG  360
CNVSNDEINA QELTIDEGTI SVSSEYSQGL LNTLSQALQN SGIDLSQASI SVHINLGRRA  420
SVSRRNASSM AAPKEQDEPL SSNLVMNSTR SGNRSDESEQ ATKKHKLDHH N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	1e-55	bHLH family protein