PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020694047.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 295aa    MW: 32730.7 Da    PI: 5.4965
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020694047.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.91.2e-18107157155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +g+++AeIrdp+    r  r++lg+f taeeAak ++ a+ +l+g
  XP_020694047.1 107 PKFRGVRRRP-WGKFAAEIRDPT----RrIRVWLGTFNTAEEAAKVYDSAAIQLRG 157
                     79********.**********84....34*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MMEKKNLDPI KHSVHIEVTS RPLSTTHQQS RTVRFFCEDI DATDSSDDDT CFNRRRVKRY  60
VQEIKFELQP STATSSAKVK SGKASAGQRK KKVAASSEKH QPMPTIPKFR GVRRRPWGKF  120
AAEIRDPTRR IRVWLGTFNT AEEAAKVYDS AAIQLRGPDA ATNFSPLPPA TKVSVSGGYD  180
SSEDSRNTCS PTSVLRRFPS AVAEEEAGLP DYVGDLNLFD EMPIYNELLE FGSYEQKLLD  240
NSAAEFGLFA SESRIPSAGF EIGSSLCQDV DDFFEDIGDL FPLDPLPSAL TSGIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.19e-35ERF family protein