PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020693982.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 313aa    MW: 36043.7 Da    PI: 7.0081
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020693982.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM169.51.1e-52141411128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     + pGfrFhPtdeelv +yL++k+++k++++ e i++++iyk++PwdLpk ++++e++wyf+++rd+ky++++r+nr+t++g+Wkatg+d++++s+
  XP_020693982.1  14 MLPGFRFHPTDEELVEFYLRRKIQQKPISI-ELIRQLNIYKYDPWDLPKLAATGENQWYFYCPRDRKYRNSSRPNRVTRAGFWKATGTDRPIYSS 107
                     579***************************.89***************88888999**************************************9 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      + + +glkk+Lvfykgra kg+ktdW+mhe+rl
  XP_020693982.1 108 eGIKCIGLKKSLVFYKGRAAKGTKTDWMMHEFRL 141
                     44455***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MEEKHDMDEE EEIMLPGFRF HPTDEELVEF YLRRKIQQKP ISIELIRQLN IYKYDPWDLP  60
KLAATGENQW YFYCPRDRKY RNSSRPNRVT RAGFWKATGT DRPIYSSEGI KCIGLKKSLV  120
FYKGRAAKGT KTDWMMHEFR LPSPNVPRPF DKNILTNDSW AICRIFKKNI NVVANRAASQ  180
SWASPLTDSA DSEFSLVNAM NSSHCNESHS PLDVYGFRSF NLINNKAEMP TSSVFSSLGT  240
LIPSCCSIDF GQQEPYNGYA DNYPLEMRGN LGTEEEDMMV KKSLNNILLG NNQWGNVRNT  300
GFPFNLPLNI SDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26870.17e-94NAC family protein