PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_020693963.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
|
||||||||
Family | ZF-HD | ||||||||
Protein Properties | Length: 249aa MW: 26886.2 Da PI: 8.7656 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 98.7 | 4.4e-31 | 30 | 85 | 3 | 57 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrev 57 ++ ++eClkNhAaslGgha+DGC+Efmps+ ++ +++++lkCaACgCHRnFHRr + XP_020693963.1 30 TIIHRECLKNHAASLGGHALDGCCEFMPSPAATlADPTSLKCAACGCHRNFHRRVS 85 5789***************************999********************75 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 249 aa Download sequence |
MEQKAQAEAQ SKLYPLPNGA VKKSHHPHPT IIHRECLKNH AASLGGHALD GCCEFMPSPA 60 ATLADPTSLK CAACGCHRNF HRRVSFAATS AEEDEIEGEV EGEGRGRKSS SAGRQPLSSF 120 FTSAPHTLLA LSRDERPSPA SVSRKRFRTK FSAEQKGRMM ELSERLGWKL QKRDEGLVED 180 YCREIGVGKG VFKVWMHNNK YQLFRALGRG DGRSNVAGVV GGGDGRMGEG NGICGEADGN 240 VMNGSSSSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G69600.1 | 6e-52 | ZF-HD family protein |