PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020693883.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 188aa MW: 20344.9 Da PI: 9.8814 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 67.1 | 3.4e-21 | 44 | 93 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +gr++AeIrd ++ ++r +lg+f+taeeAa+a+++a+++l+g XP_020693883.2 44 HYRGVRKRP-WGRFAAEIRDpWK----KTRKWLGTFDTAEEAARAYDEAARNLRG 93 69*******.**********883....5*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence |
MMAVDTLRLG KEAFGAAGEE KTTPASTAAA GGGGGGGGGT KEGHYRGVRK RPWGRFAAEI 60 RDPWKKTRKW LGTFDTAEEA ARAYDEAARN LRGPKAKTNF TDGDVPSSES SSPPAIWTAA 120 QWPQAFPDGR DLVIVAPTAG SEFSGYRFDA VEMMVRTEQE KKMKRSVAEE RITKKPLGID 180 LNLPPPLY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20310.1 | 9e-23 | ERF family protein |