PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020693861.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | GATA | ||||||||
Protein Properties | Length: 581aa MW: 65109.9 Da PI: 6.9337 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 50.8 | 2.3e-16 | 7 | 41 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+t+TplWR+gp ++ LCnaCG ++r kg+ XP_020693861.1 7 CRHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGS 41 ****************88888***********997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 581 aa Download sequence |
MGKHGPCRHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG SLANYTPLHA REPIEWEEPK 60 VTKMKSISFK TTEQRLQKRK HMNGIVEKVR QIPFSESDQN YIRTFEGDAS NRSSSGSAIS 120 CSESCANFCA VDASDCTGSA QSNAWDSLVP VPSKKRTVIN LKPSVEKLTK ELYSIWHEQQ 180 SSNLSGSSEE ELLFEGETRM GSVEIGHGGV LLRYPSSKAV EEESEASSLP ADKKLVGVPY 240 SRSASSFVDN ESKRTSFPNP GIDKFKKSAM HVVQDHARRD RFPPEYLDVL QKRDSAMRFT 300 DLKVVINLEV FMEHMKNDEQ KQLMKYLPSI DTANASESLR SLFSSPQFIE NFSYFQQLIQ 360 DGIFDLSSSE MNVEECKSLK RLVLFNFTKS SWVQHYEELK DIKHKHATGV NRGEGGSNFV 420 GQSNLIPIKR PHESQNQHLQ ESKGIMRSPK RVCRSSNTKF SLTKSSVVNP DEAGSTEILD 480 NEDFLDNEGT CFSPRSLFAS PPDRSSMLQL TDDGSDQDLL LDVRCSTSFP EAELLYHHPW 540 KQKTPSNSSL AESSAVAEEE SLCNFPASSF RSQQLNQCKG A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17570.3 | 1e-92 | GATA family protein |