PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020693851.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 251aa MW: 27642.4 Da PI: 5.4866 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.6 | 1.6e-18 | 112 | 162 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrd + k r++lg+f+ta eAa+a++ a+ +++g XP_020693851.1 112 RYRGVRQRP-WGKFAAEIRDS---KrKGSRVWLGTFDTAVEAARAYDCAAFEMRG 162 7********.**********3...2235*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MPSSNSPPLD QLFAAAGTSL NDILEAIPTP PPVPAAAPAD ITISDYLDSP EPFTSEFKVV 60 DSPVSMIRSG RNTPPSSPSD LRLTLNIPRP AAPKVEWIEP SGSGPDWIEG RRYRGVRQRP 120 WGKFAAEIRD SKRKGSRVWL GTFDTAVEAA RAYDCAAFEM RGSKAILNFP NEVRSSPEKR 180 KRKEEEEPQM LAVKMQRTEE AQRNLPDGEV LTPSSWTAVW ENADVKGLFS LPPLSPISPH 240 PTLGFPQLMV I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51190.1 | 8e-36 | ERF family protein |