PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020693801.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 266aa MW: 28625.1 Da PI: 9.3819 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64 | 3.2e-20 | 102 | 152 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp +ng +r++lg+f taeeAa a+++a+ +++g XP_020693801.1 102 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTFETAEEAALAYDRAAYRMRG 152 8********.***********9987..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 266 aa Download sequence |
MHSLDSIRRH LLDDSEMSSS GVTATPQPLY NRSSSFGRLV ADHWIEVPFR PDDSDDMVIY 60 LTLHDAFRHG WLPEGGSATA SVLPPLVKPD SPDIGVPAKG KHYRGVRQRP WGKFAAEIRD 120 PAKNGARVWL GTFETAEEAA LAYDRAAYRM RGSRALLNFP LRISEEADLS PASGKRVKPE 180 PSSPSFSSSS SSLISQSEGS TKRRKRGDAA ARMEPASPAA VSSSPSAAPL QLPAQAQAGL 240 GFGIRPVEFQ GGAVEQLTHV GQLLVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17500.1 | 6e-46 | ERF family protein |