PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020693690.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 342aa MW: 38667.4 Da PI: 5.2903

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020693690.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	157.1	7.2e-49	6	126	1	121
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtd+elv +yLk+kv+++k+el evi+ vd+yk++PwdLp k + +++ ew+fF++rd+ky++g+r+nrat+sgyWkatgkd++++ XP_020693690.1 6 LPPGFRFHPTDDELVGYYLKRKVDAQKIEL-EVIPVVDLYKFDPWDLPeKsFLPKRDMEWFFFCPRDRKYPNGSRTNRATNSGYWKATGKDRTIT 99 79**************************.99**********95344555788*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdW 121 + +++ +g++ktLvfy+grap ge+tdW XP_020693690.1 100 C-ENSIKGMRKTLVFYRGRAPGGERTDW 126 .8889********************* PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MGPMSLPPGF RFHPTDDELV GYYLKRKVDA QKIELEVIPV VDLYKFDPWD LPEKSFLPKR 60 DMEWFFFCPR DRKYPNGSRT NRATNSGYWK ATGKDRTITC ENSIKGMRKT LVFYRGRAPG 120 GERTDWGGYA LCRVVKRNEH LHQGEAKFKR VPPSVARETS KRKYNSKVPS SSLEGSSSQV 180 VSLLDVSNGP FHSNFFKETQ FELASAMVDA SDQSPLVLSD VSTGFTIEED ISEQFFPVQF 240 PFSTESCLTN GISPVSSFSS LTDEAFSVEQ IDRNCLSSIC PSPLHSMSIY YNEESLPLQS 300 LDWVADNSFL TRSNGIIEPL CRQASGDEQN LWSQEDGSMF VI

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MGPMSLPPGF RFHPTDDELV GYYLKRKVDA QKIELEVIPV VDLYKFDPWD LPEKSFLPKR  60
DMEWFFFCPR DRKYPNGSRT NRATNSGYWK ATGKDRTITC ENSIKGMRKT LVFYRGRAPG  120
GERTDWGGYA LCRVVKRNEH LHQGEAKFKR VPPSVARETS KRKYNSKVPS SSLEGSSSQV  180
VSLLDVSNGP FHSNFFKETQ FELASAMVDA SDQSPLVLSD VSTGFTIEED ISEQFFPVQF  240
PFSTESCLTN GISPVSSFSS LTDEAFSVEQ IDRNCLSSIC PSPLHSMSIY YNEESLPLQS  300
LDWVADNSFL TRSNGIIEPL CRQASGDEQN LWSQEDGSMF VI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17980.1	2e-74	NAC family protein