PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_020693689.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 361aa MW: 40936.1 Da PI: 5.4743 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 176 | 1.1e-54 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtd+elv +yLk+kv+++k+el evi+ vd+yk++PwdLp k + +++ ew+fF++rd+ky++g+r+nrat+sgyWkatgkd++++ XP_020693689.1 6 LPPGFRFHPTDDELVGYYLKRKVDAQKIEL-EVIPVVDLYKFDPWDLPeKsFLPKRDMEWFFFCPRDRKYPNGSRTNRATNSGYWKATGKDRTIT 99 79****************************.99**************95344555788************************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++ +g++ktLvfy+grap ge+tdWvmheyrl XP_020693689.1 100 C-ENSIKGMRKTLVFYRGRAPGGERTDWVMHEYRL 133 *.8889***************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 361 aa Download sequence |
MGPMSLPPGF RFHPTDDELV GYYLKRKVDA QKIELEVIPV VDLYKFDPWD LPEKSFLPKR 60 DMEWFFFCPR DRKYPNGSRT NRATNSGYWK ATGKDRTITC ENSIKGMRKT LVFYRGRAPG 120 GERTDWVMHE YRLCEHLPQG NISFLGGYAL CRVVKRNEHL HQGEAKFKRV PPSVARETSK 180 RKYNSKVPSS SLEGSSSQVV SLLDVSNGPF HSNFFKETQF ELASAMVDAS DQSPLVLSDV 240 STGFTIEEDI SEQFFPVQFP FSTESCLTNG ISPVSSFSSL TDEAFSVEQI DRNCLSSICP 300 SPLHSMSIYY NEESLPLQSL DWVADNSFLT RSNGIIEPLC RQASGDEQNL WSQEDGSMFV 360 I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G17980.1 | 1e-83 | NAC family protein |