PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020693601.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NAC | ||||||||
Protein Properties | Length: 286aa MW: 33752.3 Da PI: 7.8156 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 175.8 | 1.2e-54 | 8 | 137 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv++yL+kkv++k ++ +vik+vd++k+ePwdL+ k +++e+ewyfFs+rdkky tg+r+nratk+g+Wkatg+dk++ XP_020693601.1 8 VPPGFRFHPTDEELVNYYLRKKVSSKITDQ-DVIKDVDLCKIEPWDLQDicgKGREDEHEWYFFSHRDKKYLTGSRTNRATKTGFWKATGRDKPI 101 69***********************99888.99**************943445555777************************************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 + k++lvg++ktLvfykgrap+g+k+dW++heyrle XP_020693601.1 102 YL-KQKLVGMRKTLVFYKGRAPNGQKSDWILHEYRLE 137 **.999*****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 286 aa Download sequence |
MNIASSKVPP GFRFHPTDEE LVNYYLRKKV SSKITDQDVI KDVDLCKIEP WDLQDICGKG 60 REDEHEWYFF SHRDKKYLTG SRTNRATKTG FWKATGRDKP IYLKQKLVGM RKTLVFYKGR 120 APNGQKSDWI LHEYRLESDE CEALQEDGWV VCRVFKKRPA VTIKEENELE EPSFWYNQSL 180 RLLPPLKSQY PLDHRHHLQC SYKEQILQNF LPFMSPHHHL HLPPLELQVN EDQSIVQTKD 240 WRVLEKFVAS QLSQDGLSKC PNCCSNSQDH GTLHEQLAQQ VPYYYI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12260.1 | 3e-91 | NAC family protein |