PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020693532.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family BES1
Protein Properties Length: 301aa    MW: 32615.6 Da    PI: 8.9719
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020693532.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822211.71.8e-6541532145
          DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl...eeaeaagssasaspess 93 
                      +gr+ptwkErEnnkrRERrRRaiaaki++GLR+ Gny+lpk++DnneVlkALc+eAGw+ve+DGttyrk +kp+   ++ ++   s+++s +ss
  XP_020693532.1   4 VGGRMPTWKERENNKRRERRRRAIAAKIFSGLRNLGNYQLPKHCDNNEVLKALCAEAGWIVEEDGTTYRKECKPPlppTAGAIRTPSTKISSCSS 98 
                     589***********************************************************************987666777778889999*99 PP

          DUF822  94 lq.sslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlsl 145
                     ++ +s+ ss+++spv+sy+asp+sssfpsps+l++ ++ s   ++llp+l++ls+
  XP_020693532.1  99 SHhLSPLSSSFPSPVPSYHASPASSSFPSPSRLENYTTPSInpSHLLPFLRNLSS 153
                     999*******************************998776566999***999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MTSVGGRMPT WKERENNKRR ERRRRAIAAK IFSGLRNLGN YQLPKHCDNN EVLKALCAEA  60
GWIVEEDGTT YRKECKPPLP PTAGAIRTPS TKISSCSSSH HLSPLSSSFP SPVPSYHASP  120
ASSSFPSPSR LENYTTPSIN PSHLLPFLRN LSSLPPLRIS NSAPVTPPLS SPTSSRPLKL  180
KRLNWDYATH YHPMFAASAP ASPTRGHHQP HPATIPECGE SDASTIDSSQ WVSFQNTAPG  240
SPTFNLINTA ASVEVSAVGG VGMAEFEFGS PTVKPWEGER IHEIGTEDLE LTLSLGNTGS  300
K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.25e-53BES1 family protein