PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020693359.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NAC | ||||||||
Protein Properties | Length: 192aa MW: 21732.4 Da PI: 9.8715 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 153.9 | 7.3e-48 | 14 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelv +yLk+kv + +l++ +i+e+d+ k++PwdLp +e+e yfF r+ ky++g+r nra+ sgyWk tgk+k+++++ XP_020693359.2 14 LPPGFRFHPTDEELVLQYLKRKVFSFPLPA-AIIPEIDLGKYDPWDLP---GVGEQERYFFYLRAAKYPNGRRVNRAMGSGYWKITGKEKPIFAS 104 79***************************9.88***************...347899************************************98 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kk+Lvfy+g+ap g ktdW+mhey l XP_020693359.2 105 kSNQVVGMKKVLVFYHGKAPAGGKTDWFMHEYCL 138 56778***************************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MANPNTAKLG ALRLPPGFRF HPTDEELVLQ YLKRKVFSFP LPAAIIPEID LGKYDPWDLP 60 GVGEQERYFF YLRAAKYPNG RRVNRAMGSG YWKITGKEKP IFASKSNQVV GMKKVLVFYH 120 GKAPAGGKTD WFMHEYCLAG AGADAGVCSF GKRSNLVHVS SLSLSLPYPI CPFYVLFTKY 180 LYIYIYLYNI LI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 2e-66 | NAC family protein |