PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020693202.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | WRKY | ||||||||
Protein Properties | Length: 338aa MW: 37433.4 Da PI: 10.5087 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 99.2 | 2.6e-31 | 272 | 329 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ edp+++++tYegeH h+ XP_020693202.1 272 DEYSWRKYGQKPIKGSPYPRGYYKCSSMrGCPARKHVERCLEDPSMLIVTYEGEHSHN 329 9************************9988****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 338 aa Download sequence |
MEEVEGANRA AVESGHRLLS LLASKAEDEV QHRRNVAAET GETVSRFRKL AALLGNGVGH 60 ARVKRAKLSP QQTPFCHQKL VLDSALAAKA SPSANLLPRT GDLDRRIFLE NKPVPQIHSA 120 HPNPVQLATQ FQYLHQQQKQ NHSFQLQQHI KFQAEMLRRG NSGGINLKFD TPSCSQTMSS 180 TTRSFLSSLS MDASGSVSGL DSKSFNLIGG PQSSEPSNLH SNPRRRCTGR EDGSGKCASS 240 GRCHCSKKRK LRLKRSIKVP AISNKLADIP PDEYSWRKYG QKPIKGSPYP RGYYKCSSMR 300 GCPARKHVER CLEDPSMLIV TYEGEHSHNR LITQSAQT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28650.1 | 6e-79 | WRKY family protein |