PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020693133.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | C2H2 | ||||||||
Protein Properties | Length: 177aa MW: 18979.8 Da PI: 7.8635 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.3 | 0.00024 | 53 | 75 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cg+ F++ L H +H XP_020693133.1 53 FECKTCGRKFTTFQALGGHRASH 75 89**********99999998887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MAKRFRLVSE EEDDMVSTIC ADSFNLANVL MLLSKGHATA AVAGGEATEG KVFECKTCGR 60 KFTTFQALGG HRASHKKPRM GEAATSATAP EKPKVHECSV CGLEFAIGQA LGGHMRRHRA 120 TAEGNGSGQL GRPVMEKSSA QIDLNLPPLE RGEAEEVRQL PKLLGFTLTP AMVDCFH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28200.1 | 3e-28 | C2H2 family protein |