PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020693119.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 241aa MW: 27951.7 Da PI: 6.7894 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57 | 4.3e-18 | 10 | 57 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++lv++v ++G ++W+ Ia+ g++Rt+k+c++rw +yl XP_020693119.2 10 KGPWTEQEDLQLVCYVSLFGHRRWDFIAKISGLKRTGKSCRLRWVNYL 57 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 54.1 | 3.7e-17 | 64 | 108 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 gr+T+eE+ l+++++ ++G++ W+ Ia +++ gRt++++k++w++++ XP_020693119.2 64 GRMTPEEEHLILELHSKWGNK-WSQIAGRLP-GRTDNEIKNYWRTHM 108 89*******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MVGMEQGTRK GPWTEQEDLQ LVCYVSLFGH RRWDFIAKIS GLKRTGKSCR LRWVNYLHPG 60 LKHGRMTPEE EHLILELHSK WGNKWSQIAG RLPGRTDNEI KNYWRTHMRK MAQERKKNLL 120 SSSSSSSSSA SLSIETSTDR MENQEEVSFL LTMVEEKEQE VEVKVKGYPM DQLWNEIVNS 180 DSNTGLSFKQ YKAMEFSPLW EYCVESVWKV DDNDQPNIIP CVSDLLVSNF QNGIVLESTN 240 K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G46130.1 | 4e-67 | MYB family protein |