PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020693104.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

TALE

Protein Properties

Length: 621aa MW: 69549.6 Da PI: 6.1794

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020693104.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.7	2.2e-09	389	426	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LA+++gLt +qV++WF N R + XP_020693104.1 389 FEHflHPYPKDSEKLMLARQTGLTRSQVSNWFINARVR 426 664559******************************88 PP
2	BELL	121.7	3.1e-39	254	325	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+qe q+k +kL+++++eVd++Ykqy++q+q+v+ssF+++ag g+akpYt+lAl++iSrhFrcL+dai+ qi XP_020693104.1 254 EKQEFQNKLTKLMEMVDEVDRKYKQYYHQMQIVMSSFDVIAGAGAAKPYTTLALQTISRHFRCLRDAISAQI 325 689*******************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 621 aa Download sequence
MTVFYSSSTN QDEIMPSLYP REPARATYTE IPFQGNMMYF HHSSSAPCTV NAQDSSEEAA 60 NLVANRFGEN MYDSWREGRN EMLLMQTVGG STNDDSHLSI LSGQNFPLSG STMQGQGLSL 120 SLGTQVSVPT FHYLPATADI SFSVPNQPTS LSDGSCKKSS MIKHVQVNSS HPSVPYLMSS 180 TLNLNYLKAT QELLDEVVNV RKVLIQKRGK NQNLGDSSGF TDCKEFDVGS KSNEVPSMPR 240 DDAASSTKEL SASEKQEFQN KLTKLMEMVD EVDRKYKQYY HQMQIVMSSF DVIAGAGAAK 300 PYTTLALQTI SRHFRCLRDA ISAQIQSTRK KLGEQDNGDS VRLSRLRYID QELRQRRVVQ 360 QYGILQPHAW RPQRGLPENS VSILRAWLFE HFLHPYPKDS EKLMLARQTG LTRSQVSNWF 420 INARVRLWKP MIEEMHKEEL GDIDMDSKSS PDRLQKIQED MRYTIGKDED PQSSDAENCR 480 LSHSNEPSKS NPIIDPDTSG SGVHFDHKPR DEKLAGEESS LLQTDISNPD DGSGRIMAYQ 540 MAELGQYGTG MVSLTLGLQH WSSNLPVSND QHSFMSVRGT DVYSSNSSPL EANVGSYVFE 600 NIGDRHHGCA GSLHFMQGFT P

Sequence ? help Back to Top

Protein Sequence Length: 621 aa Download sequence

MTVFYSSSTN QDEIMPSLYP REPARATYTE IPFQGNMMYF HHSSSAPCTV NAQDSSEEAA  60
NLVANRFGEN MYDSWREGRN EMLLMQTVGG STNDDSHLSI LSGQNFPLSG STMQGQGLSL  120
SLGTQVSVPT FHYLPATADI SFSVPNQPTS LSDGSCKKSS MIKHVQVNSS HPSVPYLMSS  180
TLNLNYLKAT QELLDEVVNV RKVLIQKRGK NQNLGDSSGF TDCKEFDVGS KSNEVPSMPR  240
DDAASSTKEL SASEKQEFQN KLTKLMEMVD EVDRKYKQYY HQMQIVMSSF DVIAGAGAAK  300
PYTTLALQTI SRHFRCLRDA ISAQIQSTRK KLGEQDNGDS VRLSRLRYID QELRQRRVVQ  360
QYGILQPHAW RPQRGLPENS VSILRAWLFE HFLHPYPKDS EKLMLARQTG LTRSQVSNWF  420
INARVRLWKP MIEEMHKEEL GDIDMDSKSS PDRLQKIQED MRYTIGKDED PQSSDAENCR  480
LSHSNEPSKS NPIIDPDTSG SGVHFDHKPR DEKLAGEESS LLQTDISNPD DGSGRIMAYQ  540
MAELGQYGTG MVSLTLGLQH WSSNLPVSND QHSFMSVRGT DVYSSNSSPL EANVGSYVFE  600
NIGDRHHGCA GSLHFMQGFT P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34610.2	1e-116	TALE family protein