PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020693070.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 326aa    MW: 36900.7 Da    PI: 8.55
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020693070.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM175.51.5e-5471321128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhP+deel+++yL++k+++  + + ++i +vd++k+ePwdLp k++ +ekewyfFs +d+ky+tg r+nrat++gyWk+tgkdke+++ 
  XP_020693070.1   7 LPPGFRFHPSDEELINYYLTHKISNFGFVT-KAIVDVDLNKCEPWDLPGKASMGEKEWYFFSLKDRKYPTGMRTNRATHAGYWKTTGKDKEIFH- 99 
                     79*************************998.88***************988999****************************************. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      g+lvg+kktLvfykgrapkgekt+Wvmheyr 
  XP_020693070.1 100 YGSLVGMKKTLVFYKGRAPKGEKTSWVMHEYRQ 132
                     999****************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MDMEEGLPPG FRFHPSDEEL INYYLTHKIS NFGFVTKAIV DVDLNKCEPW DLPGKASMGE  60
KEWYFFSLKD RKYPTGMRTN RATHAGYWKT TGKDKEIFHY GSLVGMKKTL VFYKGRAPKG  120
EKTSWVMHEY RQQTKFPYKP SKEEWVVCRV FKKSNNFNMK KHHANSPSMP MLLHSPGNTT  180
SLSELGEIDA SILNNLTNSS GPFNPLLVQA NDVSSNANGN ACNNNDGNKI DLNLYMNWLY  240
GRSENAGQTF LPWTSSLLSS NSVANPAMLK ALQLSNYQLP MEAVNTGCSM NSFVGQGDPI  300
FFATHESKHG DPMQQQQVDQ SMWKGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.14e-93NAC family protein