PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020692881.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 273aa MW: 31914 Da PI: 6.5119

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020692881.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169	1.6e-52	10	138	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhP+deelv +yL kkv++kk + ++ evd++ ePwdLp+++k + +ewyfFs rd+kyatg+r+nratksgyWkatgkd+++++ XP_020692881.1 10 LPPGFRFHPSDEELVGHYLYKKVANKKASQ-GTMVEVDLHIREPWDLPEMAKLSPNEWYFFSFRDRKYATGSRTNRATKSGYWKATGKDRTIYNP 103 79***********************888.88***********88888999**********************************8 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129 k+ +g++ktLvfy grap+g kt+Wvmhe+rle XP_020692881.1 104 kKHVMIGMRKTLVFYLGRAPNGIKTNWVMHEFRLE 138 45566*************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MGLREVGTTL PPGFRFHPSD EELVGHYLYK KVANKKASQG TMVEVDLHIR EPWDLPEMAK 60 LSPNEWYFFS FRDRKYATGS RTNRATKSGY WKATGKDRTI YNPKKHVMIG MRKTLVFYLG 120 RAPNGIKTNW VMHEFRLETP NSQPKEDWVL CRVFHKRKEE REKETTTCYN TISPPDLWNT 180 SSPIVMDQSL PYYEELNGCS MSTITTYQEE DTNLNYIQNA SLMQCDFLND FTYDQMEVGP 240 KNGNIDHQYE LMWDMGLHHG HDIVNIEEVG FQG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28530.1	9e-79	NAC family protein