PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020692569.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 245aa MW: 28090.9 Da PI: 9.9522 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 95.4 | 2.5e-30 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rienk++rqvtfskRr g+lKKA+E+SvLCda+va+i+fs++gklyeys+ XP_020692569.1 10 RIENKIKRQVTFSKRRSGLLKKAHEISVLCDADVALIVFSNKGKLYEYST 59 8***********************************************96 PP | |||||||
2 | K-box | 86.8 | 4.3e-29 | 88 | 174 | 14 | 98 |
K-box 14 aeslqqelakLkkeienLq..reqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++ + ++kLk ++e+Lq ++ R+l+Ge+L++L+ keLq+LeqqLe+slk+iRs+K++l+l++i+elq+kek+l+e++k++++ + XP_020692569.1 88 QADWGLAYSKLKTRVESLQrsQSFRNLMGEELDTLNNKELQHLEQQLESSLKNIRSRKTDLMLNSISELQNKEKMLKEQKKNMEEII 174 56788899***********66667********************************************************9988765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MGRGRVQLRR IENKIKRQVT FSKRRSGLLK KAHEISVLCD ADVALIVFSN KGKLYEYSTD 60 SSMDKILERY ESYTYAERAI FSSEADPQAD WGLAYSKLKT RVESLQRSQS FRNLMGEELD 120 TLNNKELQHL EQQLESSLKN IRSRKTDLML NSISELQNKE KMLKEQKKNM EEIIAKAKAK 180 ALAQNAAWEQ QNRAPYNSSP HHVMISDSIA TPTSRNCQTR YNAEEATQGE LRLGKGLLPS 240 WMLSG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 2e-64 | MIKC_MADS family protein |