PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020692442.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 254aa MW: 29164.8 Da PI: 7.3395 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.5 | 3.7e-14 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed+llv +++ G g W+++++ g +R++k+c++rw++yl XP_020692442.1 14 KGAWTALEDKLLVSYITAAGEGKWRSVPKQAGIKRCGKSCRLRWLNYL 61 79******************************55************97 PP | |||||||
2 | Myb_DNA-binding | 53.1 | 7.1e-17 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ ++eE++l+++++k+lG++ W++Ia +++ gRt++++k++w++ XP_020692442.1 67 RGNISEEEEDLIIRLHKLLGNR-WALIAGRLP-GRTDNEIKNYWNTT 111 7899******************.*********.************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MEKKPCNNGD GLNKGAWTAL EDKLLVSYIT AAGEGKWRSV PKQAGIKRCG KSCRLRWLNY 60 LRPNIKRGNI SEEEEDLIIR LHKLLGNRWA LIAGRLPGRT DNEIKNYWNT TLSKKVRTQN 120 FAINKPNNKP WGHNSKPQQN ATSSTSIPTL IQTKPLRCTK ASHPYFPLQI PSSIDGVDQT 180 QQIIQQNFGD EIMEEEKKES AMVNNNDLLF FYDAMWTDEL EFENWSKGGD DYDGILCNDD 240 WFYGSSDTDI WQNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 2e-58 | MYB family protein |