PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020691994.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 259aa MW: 28586.5 Da PI: 9.3341 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61 | 2.7e-19 | 117 | 169 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++y+GVr ++ +g+++AeIrdp+ ++ r++lg+f+ta eAa+a+++a+ +++g+ XP_020691994.1 117 TQYRGVRKRR-WGKFAAEIRDPKR--RKSRVWLGTFDTALEAARAYDRAAFQMRGN 169 58*****887.**********944..35*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MAFAYLSALD RINKHLFSDP PASTLDEILA ALPTPPSLPA PHLADLDVSD YLDHNETLIL 60 PPASSNSHGG VRCPDPTSSI IRLDADSPST LTNPNAAADQ LSPPPAAAVI DSRQYRTQYR 120 GVRKRRWGKF AAEIRDPKRR KSRVWLGTFD TALEAARAYD RAAFQMRGNK AILNFPNEVG 180 RSGKWIQSPV AATVKRKREV EKEKLEVFER NIPTLDGPST TSSWKAVWDD LDVLGDFALQ 240 PLSPLSPYAA MGFPRVMVI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 123 | 141 | RKRRWGKFAAEIRDPKRRK |
2 | 124 | 142 | RKRRWGKFAAEIRDPKRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51190.1 | 1e-24 | ERF family protein |