PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020691867.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 202aa MW: 23489.9 Da PI: 9.3686 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.1 | 5.5e-29 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRrng+lKKA+ELSvLCdae+ +i+fss+gklye+ss XP_020691867.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEIGLIVFSSSGKLYEFSS 59 8***********************************************96 PP | |||||||
2 | K-box | 72.3 | 1.5e-24 | 78 | 171 | 5 | 98 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++++ +e++ ++++++l+ ++ie L ++R+l+Ge+Les+s++eL++Le+qLe+sl++i+++Kn +l+e+i +l+ ke+elqeen L+++ XP_020691867.1 78 ENSRSTEQNIQQWKHDLEVKARKIELLDVSKRKLMGESLESCSVEELNELESQLEQSLSRIKKRKNLVLKEKITQLKDKERELQEENDLLKRQA 171 6667899***********************************************************************************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MVRGKTEVRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEIGLIVFSS SGKLYEFSSS 60 SMLNTIERYK MHVKDMIENS RSTEQNIQQW KHDLEVKARK IELLDVSKRK LMGESLESCS 120 VEELNELESQ LEQSLSRIKK RKNLVLKEKI TQLKDKEREL QEENDLLKRQ ASRLASSLEI 180 VPQGDSHYKD VETELYIGWP GR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 7e-58 | MIKC_MADS family protein |