PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020691783.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | G2-like | ||||||||
Protein Properties | Length: 349aa MW: 38908.4 Da PI: 6.1553 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 98.8 | 3.7e-31 | 175 | 229 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av++L G+ekAtPk +l lm+ +gLt++h+kSHLQkYRl XP_020691783.1 175 KPRLRWTLELHERFVDAVNKLDGPEKATPKGVLMLMNTEGLTIYHIKSHLQKYRL 229 79****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 54.4 | 2.8e-17 | 177 | 228 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav++l g+ t+k + m+ +g+t +++ks++qky+ XP_020691783.1 177 RLRWTLELHERFVDAVNKLDGPekaTPKGVLMLMNtEGLTIYHIKSHLQKYR 228 89*************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence |
MDSAPQTPPS SMSHPQKSEY AFSRTSTFCT KLYSSNSTNS ETCGLLNNLP FHAQHPKSGQ 60 EGVNNMPKHS DDLTKEFLNL SGEISGDRIH DGNHNSSNMS LMEQMDLQIL SEQLGIAITD 120 NGDCPSLDDI YETPQSSGFP SFQSGFLQAH EKLSTPAKVR THSSYSTSGS LSIVKPRLRW 180 TLELHERFVD AVNKLDGPEK ATPKGVLMLM NTEGLTIYHI KSHLQKYRLA KFLPDTIEDK 240 KASHAEDTRE ISSSHDSDTA LKRNIQVTEA LRIQMEVQKM LHEQLELQTQ YSCGAIIDIV 300 GAPKYGHNGA QFLFDSLATS EESQRHKAHP TIQVPQSPSN LQPESFFYE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13040.1 | 6e-63 | G2-like family protein |