PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020691782.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

G2-like

Protein Properties

Length: 363aa MW: 40670.4 Da PI: 6.681

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020691782.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98.7	3.9e-31	175	229	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av++L G+ekAtPk +l lm+ +gLt++h+kSHLQkYRl XP_020691782.1 175 KPRLRWTLELHERFVDAVNKLDGPEKATPKGVLMLMNTEGLTIYHIKSHLQKYRL 229 79****************************************************8 PP
2	Myb_DNA-binding	54.4	3e-17	177	228	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav++l g+ t+k + m+ +g+t +++ks++qky+ XP_020691782.1 177 RLRWTLELHERFVDAVNKLDGPekaTPKGVLMLMNtEGLTIYHIKSHLQKYR 228 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MDSAPQTPPS SMSHPQKSEY AFSRTSTFCT KLYSSNSTNS ETCGLLNNLP FHAQHPKSGQ 60 EGVNNMPKHS DDLTKEFLNL SGEISGDRIH DGNHNSSNMS LMEQMDLQIL SEQLGIAITD 120 NGDCPSLDDI YETPQSSGFP SFQSGFLQAH EKLSTPAKVR THSSYSTSGS LSIVKPRLRW 180 TLELHERFVD AVNKLDGPEK ATPKGVLMLM NTEGLTIYHI KSHLQKYRLA KFLPDTIEDK 240 KASHAEDTRE ISSSHDSDTA LKRNIQVTEA LRIQMEVQKM LHEQLEVQRS LQLRVEEHSR 300 YLQKIIEEQQ NTTNSLVSSN QNQALKSQTE SSDQSSPVRP AGSISSPTKD KDLVTEFKKR 360 KVQ

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MDSAPQTPPS SMSHPQKSEY AFSRTSTFCT KLYSSNSTNS ETCGLLNNLP FHAQHPKSGQ  60
EGVNNMPKHS DDLTKEFLNL SGEISGDRIH DGNHNSSNMS LMEQMDLQIL SEQLGIAITD  120
NGDCPSLDDI YETPQSSGFP SFQSGFLQAH EKLSTPAKVR THSSYSTSGS LSIVKPRLRW  180
TLELHERFVD AVNKLDGPEK ATPKGVLMLM NTEGLTIYHI KSHLQKYRLA KFLPDTIEDK  240
KASHAEDTRE ISSSHDSDTA LKRNIQVTEA LRIQMEVQKM LHEQLEVQRS LQLRVEEHSR  300
YLQKIIEEQQ NTTNSLVSSN QNQALKSQTE SSDQSSPVRP AGSISSPTKD KDLVTEFKKR  360
KVQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13040.1	6e-79	G2-like family protein