PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020691134.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NAC | ||||||||
Protein Properties | Length: 222aa MW: 25025.5 Da PI: 8.706 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 111.7 | 8.1e-35 | 47 | 190 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.........t 78 lp+G++F+Ptd+el+ e+L++kv+++ ++++ i+ +i++++P++Lp ++++ + +fF++ +k+y+tg+rk+r+ XP_020691134.1 47 LPAGVKFDPTDQELI-EHLEAKVSTHGlgshplIDEFILtIDGEdGICYTHPEKLP-GLAKDGVSKHFFHRPSKAYTTGTRKRRKiqttevnneQ 139 799************.99******9997776664444444777646**********.444556788******************76776666544 PP NAM 79 ksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+k+v++ kge +g+kk+Lv+y g+ +k+ekt+Wvmh+y+l XP_020691134.1 140 GETRWHKTGKTKPVIV-KGEPKGCKKILVLYanFGKCRKPEKTNWVMHQYHL 190 4788************.999***********6547889999*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MNKSPIASAT RASDLINAKL AEHQIIGSNL CPTCNYKIDQ KHDWIGLPAG VKFDPTDQEL 60 IEHLEAKVST HGLGSHPLID EFILTIDGED GICYTHPEKL PGLAKDGVSK HFFHRPSKAY 120 TTGTRKRRKI QTTEVNNEQG ETRWHKTGKT KPVIVKGEPK GCKKILVLYA NFGKCRKPEK 180 TNWVMHQYHL GEMEDEKEGE LVVSKIFYQT QQRQFSASET GS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 125 | 151 | RKRRKIQTTEVNNEQGETRWHKTGKTK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29230.1 | 1e-116 | NAC family protein |