PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020691102.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NAC | ||||||||
Protein Properties | Length: 330aa MW: 37903.6 Da PI: 7.3628 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 167.4 | 4.8e-52 | 8 | 135 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeel+ +yL++++++ + ++ ++i+evdiyk++PwdLp+k+ +++ewyfF++rd+ky++g r+nra+ sgyWkatg+dk++ XP_020691102.2 8 LPPGFRFHPTDEELIIHYLRNRTAAASspSPV-SIIAEVDIYKFDPWDLPEKALFGDREWYFFTPRDRKYPNGVRPNRAAVSGYWKATGTDKAIS 101 79*******************98888743444.77***************888889*************************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s ++++vg+kk Lvfykg+ pkg kt+W+mheyrl XP_020691102.2 102 S-GSNNVGVKKALVFYKGKPPKGFKTNWIMHEYRL 135 9.999****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 330 aa Download sequence |
MYNPVTQLPP GFRFHPTDEE LIIHYLRNRT AAASSPSPVS IIAEVDIYKF DPWDLPEKAL 60 FGDREWYFFT PRDRKYPNGV RPNRAAVSGY WKATGTDKAI SSGSNNVGVK KALVFYKGKP 120 PKGFKTNWIM HEYRLADSQN SNKYRPMSMR LPDHSMRMDD WVLCRIYRKS RHLPPPVIID 180 QELENSCADD TYIPTQSLPL QHNLLKLPKT SSISEFFEDF SQLSNAFDIP LDLPRFDKNP 240 LIGHPISNLL QTNDDNNDTK AYFLPQLSQI ESSDHSLSLK HQKHDERNSK EDTNGSSQNF 300 SGLFDNSQYS LLNQPFFSQQ LLINSLSGLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69490.1 | 4e-82 | NAC family protein |