PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020691074.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 237aa MW: 27283.6 Da PI: 6.6677 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.6 | 1.9e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd++lvd + G ++W+++++ g+ R++k+c++rw +yl XP_020691074.1 14 RGSWTAEEDQKLVDFILNNGIHCWRLVPKLAGLMRCGKSCRLRWINYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 44.8 | 2.8e-14 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ ++ E++++++++ lG++ W++Ia++++ gRt++++k+ w++ XP_020691074.1 67 RGALSETEEQQIIKLHSNLGNR-WSKIASHFP-GRTDNEIKNIWNT 110 78889*****************.*********.*********9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MGRQPCCDKE RVKRGSWTAE EDQKLVDFIL NNGIHCWRLV PKLAGLMRCG KSCRLRWINY 60 LRPDLKRGAL SETEEQQIIK LHSNLGNRWS KIASHFPGRT DNEIKNIWNT TIKKKLKLQS 120 SDQLTAKNNE ADRKKLISKI EDKGLVIETS TESSKSSSFQ ELEQNWTQEM KLIQANLSIS 180 CSASTSMEGN VNPSSWEGES NVHGESDELF WADTIDYSSS WDAYNFVDDF LHYENYP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14340.1 | 1e-59 | MYB family protein |