PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020690947.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | HSF | ||||||||
Protein Properties | Length: 132aa MW: 15147.5 Da PI: 9.5436 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 116.8 | 1.3e-36 | 24 | 115 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+y++++d++++++isw+++g++fvv+++ efa+++LpkyFkh+nf+SFvRQLn+YgFkk+ ++ weF+++sFk+gkk ll++ XP_020690947.1 24 FLAKTYQLVDDPTIDDVISWNDDGSTFVVWKPVEFARDLLPKYFKHNNFSSFVRQLNTYGFKKIVPDR---------WEFSNDSFKRGKKWLLCE 109 9****************************************************************999.........****************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k XP_020690947.1 110 INRRKM 115 ***986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 132 aa Download sequence |
MVALPLAIEP PATVEAQRSM PTPFLAKTYQ LVDDPTIDDV ISWNDDGSTF VVWKPVEFAR 60 DLLPKYFKHN NFSSFVRQLN TYGFKKIVPD RWEFSNDSFK RGKKWLLCEI NRRKMATPVV 120 SAVALEAAPV NR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11660.1 | 3e-59 | HSF family protein |