PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020690748.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 348aa MW: 39076.9 Da PI: 10.4069 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.3 | 5.3e-20 | 116 | 166 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +++GVr+++ +g+W+AeIrdp+ +rkr++lg+f +aeeAa a++ a+ +l+ge XP_020690748.1 116 RFRGVRRRP-WGKWAAEIRDPN---QRKRVWLGTFNSAEEAATAYDVAAVRLKGE 166 79*******.**********93...36*************************996 PP | |||||||
2 | Homeobox | 17.3 | 8.4e-06 | 289 | 322 | 21 | 54 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L k++gL + + +WF +R + XP_020690748.1 289 KWPYPTEEDKAKLVKETGLHLKEINNWFMTQRNR 322 469*************************999976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 348 aa Download sequence |
MSSRPNGDES NSPERTGEPR PTSHEEDAED VACRKTEKTS DIWPVEKPRS LRILFTDADA 60 TDSSSSDREG VGHIRRRARR HVHEIEFKSV PVNRRVPAKG PATATWVSPE DGSMKRFRGV 120 RRRPWGKWAA EIRDPNQRKR VWLGTFNSAE EAATAYDVAA VRLKGENAVT NFPHRKLSER 180 QVPPAKKSGN GADSAGEVPD ATASICENGR PPNGILKIPD CLGFGHVVPT GSESSLMDRA 240 RKELEHNLKK GYKEKIMGIR ERFLLKRTAV RVTGDTASLL KAWWRSHSKW PYPTEEDKAK 300 LVKETGLHLK EINNWFMTQR NRNWHKHSSS TELKTTCNGS SAGDAALF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25220.1 | 4e-50 | TALE family protein |