PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020690747.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

ERF

Protein Properties

Length: 351aa MW: 39673.7 Da PI: 10.4082

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020690747.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	63.2	5.4e-20	116	166	2	56
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +++GVr+++ +g+W+AeIrdp+ +rkr++lg+f +aeeAa a++ a+ +l+ge XP_020690747.1 116 RFRGVRRRP-WGKWAAEIRDPN---QRKRVWLGTFNSAEEAATAYDVAAVRLKGE 166 79*****.******93...36***********************996 PP
2	Homeobox	17.3	8.5e-06	289	322	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L k++gL + + +WF +R + XP_020690747.1 289 KWPYPTEEDKAKLVKETGLHLKEINNWFMTQRNR 322 469*************************999976 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MSSRPNGDES NSPERTGEPR PTSHEEDAED VACRKTEKTS DIWPVEKPRS LRILFTDADA 60 TDSSSSDREG VGHIRRRARR HVHEIEFKSV PVNRRVPAKG PATATWVSPE DGSMKRFRGV 120 RRRPWGKWAA EIRDPNQRKR VWLGTFNSAE EAATAYDVAA VRLKGENAVT NFPHRKLSER 180 QVPPAKKSGN GADSAGEVPD ATASICENGR PPNGILKIPD CLGFGHVVPT GSESSLMDRA 240 RKELEHNLKK GYKEKIMGIR ERFLLKRTAV RVTGDTASLL KAWWRSHSKW PYPTEEDKAK 300 LVKETGLHLK EINNWFMTQR NRNWHKHSSS TELKTTCNGR CCSVLRCNFF S

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MSSRPNGDES NSPERTGEPR PTSHEEDAED VACRKTEKTS DIWPVEKPRS LRILFTDADA  60
TDSSSSDREG VGHIRRRARR HVHEIEFKSV PVNRRVPAKG PATATWVSPE DGSMKRFRGV  120
RRRPWGKWAA EIRDPNQRKR VWLGTFNSAE EAATAYDVAA VRLKGENAVT NFPHRKLSER  180
QVPPAKKSGN GADSAGEVPD ATASICENGR PPNGILKIPD CLGFGHVVPT GSESSLMDRA  240
RKELEHNLKK GYKEKIMGIR ERFLLKRTAV RVTGDTASLL KAWWRSHSKW PYPTEEDKAK  300
LVKETGLHLK EINNWFMTQR NRNWHKHSSS TELKTTCNGR CCSVLRCNFF S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.2	3e-49	TALE family protein