PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020690722.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 133aa    MW: 14862.2 Da    PI: 7.9076
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020690722.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.46.2e-091660655
                    HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    + + r+RR+ri ++ +eL +++P        Kls a++ + A +YIk L+
  XP_020690722.2 16 SVAARKRRKRISEKTQELARHIPGG-----VKLSTADMFQSAYKYIKFLE 60
                    5677*******************96.....6****************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    
MAPGCSAPPP SLSAQSVAAR KRRKRISEKT QELARHIPGG VKLSTADMFQ SAYKYIKFLE  60
AQLAVLELTT PSVQECGSRK EDEYLYALLA SLTMQEKLAA QEMCLVPLYE LPGLKESCID  120
QYLTQYFSLF STF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.12e-24bHLH family protein