PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020690587.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 387aa MW: 43857.8 Da PI: 8.361

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020690587.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	158	3.8e-49	14	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGf FhPtd el+++yL++k +g+k ++ evi+e+diyk ePwdLp+ + ++++ w+fF++rd+ky++g+r+nrat++gyWk+tgkd+++ XP_020690587.1 14 LPPGFGFHPTDVELISHYLRRKNQGQKADF-EVIPELDIYKREPWDLPAccPIPTRDSMWHFFASRDRKYPNGSRTNRATEAGYWKSTGKDRNIR 107 79***********************999.99***********6345666899********************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++g+kktLvf++gr p+g++tdW+mhey + XP_020690587.1 108 F-LNQVIGTKKTLVFHQGRPPSGKRTDWIMHEYFM 141 9.8999*************************75 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MLKISVKMEA LKALPPGFGF HPTDVELISH YLRRKNQGQK ADFEVIPELD IYKREPWDLP 60 ACCPIPTRDS MWHFFASRDR KYPNGSRTNR ATEAGYWKST GKDRNIRFLN QVIGTKKTLV 120 FHQGRPPSGK RTDWIMHEYF MDEKESKTSS VIKSTYVLCR VTKRNGFAVE GSNVSAQTEE 180 ANAYQNTAKA LYLSLHESMA QQKSSQSEST ENLNAWFEEL LFDGSIHFNI TSSIESKTAP 240 QVSQNVHHAL IPKDEPLDLG FWPEEIIDVL HDDISAMPEI NELLAVDHKA TSSLINSNKY 300 ETDGFEKAIP AIGTFQHNVK LQVQSRKMES LNSASVCQTI KPAQVDCGIK NNRPRKPINL 360 KLENKREAIQ DAIKGLLAVV RSFFSCV

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MLKISVKMEA LKALPPGFGF HPTDVELISH YLRRKNQGQK ADFEVIPELD IYKREPWDLP  60
ACCPIPTRDS MWHFFASRDR KYPNGSRTNR ATEAGYWKST GKDRNIRFLN QVIGTKKTLV  120
FHQGRPPSGK RTDWIMHEYF MDEKESKTSS VIKSTYVLCR VTKRNGFAVE GSNVSAQTEE  180
ANAYQNTAKA LYLSLHESMA QQKSSQSEST ENLNAWFEEL LFDGSIHFNI TSSIESKTAP  240
QVSQNVHHAL IPKDEPLDLG FWPEEIIDVL HDDISAMPEI NELLAVDHKA TSSLINSNKY  300
ETDGFEKAIP AIGTFQHNVK LQVQSRKMES LNSASVCQTI KPAQVDCGIK NNRPRKPINL  360
KLENKREAIQ DAIKGLLAVV RSFFSCV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	9e-67	NAC family protein