PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020690491.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family Nin-like
Protein Properties Length: 397aa    MW: 44261.1 Da    PI: 8.2417
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020690491.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK92.82.5e-291969252
          RWP-RK  2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
                    ek+isl++l+kyF++++kdAAk+Lgvc+T+LKriCRq GI+RWP+Rkik++
  XP_020690491.1 19 EKHISLNVLQKYFAGSLKDAAKSLGVCPTTLKRICRQQGISRWPSRKIKKV 69
                    89***********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    
MQVKYGSKKQ IDTKRSTSEK HISLNVLQKY FAGSLKDAAK SLGVCPTTLK RICRQQGISR  60
WPSRKIKKVN HSLKKIQSVI NSVQGVEGTL QYDPKTGCLV AAVTPEKLST IAPESIAMSA  120
DVPFSSSPEC RDRESDEKLE LNNRKVTCQR VNIVSKLNLP NAYHPETNEV HLPNDFNTKS  180
KVTFSNVEIS RYDYRKGSGS LSLSSEDVNL KGRDGCIQYS TDKSGFQSFV PMSSDSVGKE  240
DEMDVKSGIN VGREHSHSSF SSMTDSSNES TSCCPIFKES SKNESFVSYK GPAYTVKATY  300
KADTVRFKLL PSMGCLHLYE EVGKRFKLSI GTFQLKYLDD EEEWIMLTTD SDLKECIEVL  360
ESIASQSMKL QVRDVPFTVV SSPAIAASQW ITEDPER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59580.14e-39Nin-like family protein