PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020690331.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NF-YC | ||||||||
Protein Properties | Length: 183aa MW: 19592.2 Da PI: 4.5082 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 174.3 | 1.3e-54 | 1 | 102 | 4 | 102 |
NF-YC 4 sfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdi 95 +fw++q +e+a dfknh+lPlarikki+kadedv+misaeaP+l++kacelfilelt+rsw+haeenkrrtl+k+diaaa+trtdifdflvdi XP_020690331.1 1 MFWTYQrqeMEQAGDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWIHAEENKRRTLQKNDIAAAITRTDIFDFLVDI 95 699988888************************************************************************************** PP NF-YC 96 vprdelk 102 vpr+++k XP_020690331.1 96 VPREDIK 102 ***9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MFWTYQRQEM EQAGDFKNHQ LPLARIKKIM KADEDVRMIS AEAPILFAKA CELFILELTI 60 RSWIHAEENK RRTLQKNDIA AAITRTDIFD FLVDIVPRED IKEVVAAAPL GGEGAAAAGV 120 PYYYSTMGAT GMYVGQPPGM GWWGEEDGSG GFGGGGGGGG VEVVQGYGVA GDQPTAPAPP 180 PGS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 71 | 77 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63470.2 | 1e-69 | NF-YC family protein |