PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020690248.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NAC | ||||||||
Protein Properties | Length: 327aa MW: 37205.7 Da PI: 7.2514 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 169.2 | 1.4e-52 | 14 | 143 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeel+ +yLkkkv+ +k++l evi+evd++k+ePwdL++ ++ a ++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk + XP_020690248.1 14 VPPGFRFHPTDEELLLYYLKKKVSFEKFDL-EVIREVDLNKTEPWDLQErcRIGAtPQSEWYFFSHKDRKYPTGSRTNRATSAGFWKATGRDKCI 107 69****************************.99**************963433332455************************************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 + + +++g++ktLvfy+grap+g ktdW+mheyrle XP_020690248.1 108 RT-SYNKIGMRKTLVFYRGRAPHGLKTDWIMHEYRLE 143 *9.8899****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 327 aa Download sequence |
MASSSSVTTS SSGVPPGFRF HPTDEELLLY YLKKKVSFEK FDLEVIREVD LNKTEPWDLQ 60 ERCRIGATPQ SEWYFFSHKD RKYPTGSRTN RATSAGFWKA TGRDKCIRTS YNKIGMRKTL 120 VFYRGRAPHG LKTDWIMHEY RLEDSDDLQA DGTEDGWVVC RVFKKKSLMK IAGDSHTSKG 180 IDGVMNPTAG PTSLDRSRAL AAQYLNQQQS LHLHHQAYSA FYKPEIAFHY PQLTPAATNN 240 YPHVQVHDLL SNHRPVIGYH DFSVLPNDCE PMQEVGEGRD HHAANEWALM DNLEERFTGA 300 GAVSAVQQMN EIAQQRGAEM DLWGYGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G10350.1 | 8e-96 | NAC family protein |