PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020690062.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 365aa    MW: 39235.8 Da    PI: 6.1819
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020690062.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY87.98.7e-28183243259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     dDgy+WrKYGqK + gs+fprsY+rCt++   gC++k+kv+r + dp++ eitY g+H+++
  XP_020690062.1 183 DDGYTWRKYGQKAILGSKFPRSYFRCTHRnfyGCKAKRKVQRLDADPNTYEITYCGNHTCQ 243
                     8***************************99999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
MDEILNQVLQ ACRLSRELES SLPHIANNPN VLLASCEQVS LAFNKVVYDL RGCLGGSSSS  60
FDPTGQLIIG ERIMEDWSHL HDPDSMPTGQ MAFSQFGLDI QVTGAAIAAV EFADVGGGGR  120
LAGGEQEHAV VVVSEAETGH GGRLGGPVGS TGQRPSRRRR DSGDTRTVRI PALRTGNLEL  180
PPDDGYTWRK YGQKAILGSK FPRSYFRCTH RNFYGCKAKR KVQRLDADPN TYEITYCGNH  240
TCQTSPTPLI LPSMTPTTNE SMSGNVAIMT GASPPPAFPL STSIELSSWF LKEHESEGKA  300
PSRPFLSSHE VGESSRAHAG PSEQAAPPVR TGREGEGSVA DLADAMFNSG SSSNSMDTIF  360
TFKTD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.13e-35WRKY family protein