PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020689952.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NF-YA | ||||||||
Protein Properties | Length: 196aa MW: 21332.7 Da PI: 7.3902 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 105.6 | 4.2e-33 | 107 | 163 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq+Rak+e+e+kl +ksrkpy+heSRh hA+rR+Rg+gGrF XP_020689952.1 107 EEPVYVNAKQYHGILRRRQSRAKAESENKL-IKSRKPYIHESRHLHAMRRARGNGGRF 163 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
MMTSAAVDFS GSESSGEDEP QKQSLSETEN QASTNGSFQP GIAMPSTVHF VPHSQLAAGH 60 IMAPVAYPYV DPYYGGIIAA YSGQHLMHPT MTGIMQPGVP LPTDTVEEPV YVNAKQYHGI 120 LRRRQSRAKA ESENKLIKSR KPYIHESRHL HAMRRARGNG GRFLNSKGKD DQDLEASSHD 180 NSQLCNAPAS QNPASS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.2 | 1e-45 | NF-YA family protein |