PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020689949.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NF-YA
Protein Properties Length: 196aa    MW: 21332.7 Da    PI: 7.3902
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020689949.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA105.64.2e-33107163158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RRq+Rak+e+e+kl +ksrkpy+heSRh hA+rR+Rg+gGrF
  XP_020689949.1 107 EEPVYVNAKQYHGILRRRQSRAKAESENKL-IKSRKPYIHESRHLHAMRRARGNGGRF 163
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MMTSAAVDFS GSESSGEDEP QKQSLSETEN QASTNGSFQP GIAMPSTVHF VPHSQLAAGH  60
IMAPVAYPYV DPYYGGIIAA YSGQHLMHPT MTGIMQPGVP LPTDTVEEPV YVNAKQYHGI  120
LRRRQSRAKA ESENKLIKSR KPYIHESRHL HAMRRARGNG GRFLNSKGKD DQDLEASSHD  180
NSQLCNAPAS QNPASS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.21e-45NF-YA family protein