PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020689903.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

TALE

Protein Properties

Length: 302aa MW: 34400.1 Da PI: 6.4538

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020689903.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.2	1.2e-07	250	283	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + XP_020689903.1 250 KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 283 469*****************************87 PP
2	ELK	22.6	2.5e-08	204	225	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++++ ++++E++ XP_020689903.1 204 ELKLELKQGFRSRIEDVREEIL 225 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MMQGDPHQDL GMHISTAAAV GECSSSVPPS AAAEEEHRRL LKAEISVHPF LEQLLSAHVG 60 CLRVATPIDH LPLIDAQLSQ SHHLLRSYAS LHRPLLSPQE KLDLDNFLMQ YSLLLCSFKE 120 QLQQHVRVHA VEAVMACREI EQSLHELTGI TLDEGTGATM SDDEDDLQLD CSLDPAMDGH 180 DLMGFGPLLP SETERSLMER VRQELKLELK QGFRSRIEDV REEILRKRRA GKLPGDTTSV 240 LKQWWQQHSK WPYPTEDDKA KLVEETGLQL KQINNWFINQ RKRNWHNNAQ SATSCLKSKR 300 KR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	281	302	RKRNWHNNAQSATSCLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62990.1	1e-151	TALE family protein