PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020689826.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 314aa    MW: 35401.1 Da    PI: 8.1398
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020689826.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM171.13.5e-53111421128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                     lppGfrFhP+d+elv++yL+kk++g        +   ++ +vd++k+ePwdLp+++  + kewyfF+ rd+kyatg+r+nrat+sgyWkatgkd+
  XP_020689826.2  11 LPPGFRFHPRDDELVCDYLEKKLSGGAdngssYQSRLMMIDVDLNKCEPWDLPEMACVGGKEWYFFTLRDRKYATGQRTNRATESGYWKATGKDR 105
                     79**********************9996665544434699*************7667799*********************************** PP

             NAM  91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +v++ k+ lvg++ktLvfy+grapkg+ktdWvmhe+r 
  XP_020689826.2 106 PVIR-KEVLVGMRKTLVFYEGRAPKGKKTDWVMHEFRT 142
                     ***9.999****************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MSVLSMMEAR LPPGFRFHPR DDELVCDYLE KKLSGGADNG SSYQSRLMMI DVDLNKCEPW  60
DLPEMACVGG KEWYFFTLRD RKYATGQRTN RATESGYWKA TGKDRPVIRK EVLVGMRKTL  120
VFYEGRAPKG KKTDWVMHEF RTETTTTDST KISIREDWAL CRVFFKSRST VPNLTATTSM  180
NPFHGYDHNA SSSLPPLMDT YFTFDHPVGN HSQTHMSNLQ VLHPELQVPC FSNSLPGPTA  240
AAISHQPAPY RSTSQPTWPP AMNPNCDRKM IKAVLSQLTM LEGGQKREAS MSSGDGAVES  300
YLSTEAGLHS QNIW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56010.24e-92NAC family protein