PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020689823.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 138aa MW: 15094.9 Da PI: 5.2835 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.1 | 1.2e-19 | 20 | 71 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +++GVr+++ +g+++AeIrd s++g + r +lg+f+taeeAa+a+++a+ +++g+ XP_020689823.1 20 RFRGVRRRP-WGKFAAEIRD-STRG-SVRLWLGTFDTAEEAARAYDRAAVAMRGH 71 69*******.**********.4555.7**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 138 aa Download sequence |
MEDQDHPVQY SARSGEKPVR FRGVRRRPWG KFAAEIRDST RGSVRLWLGT FDTAEEAARA 60 YDRAAVAMRG HLAILNFPGE LPSSTTAGTT ASPASSLPEM DLTGLRSVAG RGKQVIELEC 120 LDDKLLEDLL YLGEEGSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23230.1 | 7e-24 | ERF family protein |