PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020689815.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 226aa MW: 24995.9 Da PI: 4.9139 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.6 | 1.8e-19 | 94 | 144 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+++AeIrd + ng r++lg+f+t+e Aa a+++a+ +++g+ XP_020689815.1 94 YRGVRRRP-WGKFAAEIRDSTRNG--VRVWLGTFDTPEAAAMAYDQAAFSMRGA 144 9*******.**********44465..*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MDSSVLFHSP LMSELSSDSS VDSSSTSNSF LPFNVDDSED MLLFNMMLAA AATTLGGAAN 60 TSNSNSDSDA TANLLKEEEV ESASTLRREQ MRSYRGVRRR PWGKFAAEIR DSTRNGVRVW 120 LGTFDTPEAA AMAYDQAAFS MRGAMAVLNF PVEKVRESLR GVRYVEEGCS PVVALKRRHS 180 IRRKSAALAA REKEVERRND TVVELEDLGV EYLEELLRVS DVASHC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 3e-59 | ERF family protein |