PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020689730.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 275aa    MW: 31701.4 Da    PI: 6.7867
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020689730.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM176.86e-5571351128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPt+eelv +yL++k++++++++ e+i+++d+yk+ePw+L++     ++e++ewyfFs++d+ky++g+r+nrat+sg+Wkatg+dke+
  XP_020689730.1   7 VPPGFRFHPTEEELVGYYLTRKISSQRIDI-EIIADIDLYKIEPWELQHrckFGYQEQNEWYFFSHKDRKYPSGTRTNRATASGFWKATGRDKEI 100
                     69****************************.99**************953432234677************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +s k++++g++ktLvfy+grap+g+k+dW+mheyrl
  XP_020689730.1 101 VS-KSKVIGMRKTLVFYEGRAPNGRKSDWIMHEYRL 135
                     **.999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MEVESCVPPG FRFHPTEEEL VGYYLTRKIS SQRIDIEIIA DIDLYKIEPW ELQHRCKFGY  60
QEQNEWYFFS HKDRKYPSGT RTNRATASGF WKATGRDKEI VSKSKVIGMR KTLVFYEGRA  120
PNGRKSDWIM HEYRLHSSDQ LAPNSQEEGW VVCRAFKKQS PIHERHCFST NNPSYFLRAD  180
QNHYEIVQME TNASFSYEPL HGFGIGNESK ECHNVFAIPQ LENPAGFSSS SDLLAKGSHA  240
TSNSIDWKMV EKLLASQFSE SASCSNSEHI NGCYE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.11e-94NAC family protein