PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_020689591.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 162aa MW: 18798.3 Da PI: 10.3305 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 104.6 | 5.5e-33 | 83 | 141 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+ +v++tYeg H h+ XP_020689591.1 83 LDDGYRWRKYGQKAVKNNKFPRSYYRCTHEGCNVKKQVQRLSKDEGIVVTTYEGIHSHP 141 59********************************************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 162 aa Download sequence |
MLKKASITMN KQEDISTKNY LLPNFTNGFP GFRDSINTTM KKVMEGGNEE EEKNGSSVGK 60 KKGEKKVKRP RFAFQTRSQV DILDDGYRWR KYGQKAVKNN KFPRSYYRCT HEGCNVKKQV 120 QRLSKDEGIV VTTYEGIHSH PTEKNSDNFE QILSQMKIYT RS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G13080.1 | 1e-54 | WRKY family protein |