PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020689581.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | FAR1 | ||||||||
Protein Properties | Length: 190aa MW: 21722.7 Da PI: 9.9558 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 78.1 | 1.7e-24 | 23 | 109 | 3 | 90 |
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y++YA+++GFsvrk++++ +++ i++++fvCsk g+++e+++ +k + +r++trtgC a+++ + +kdg w v+k ++ HnHela XP_020689581.1 23 YCQYAHSTGFSVRKEHHHFWPNTRLIKSKDFVCSKAGFKKENESG-TKLKYRRSSTRTGCPAMIRFSVSKDGLWSVYKSVESHNHELA 109 99****************************************999.99999***********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence |
MGSVDMRKLL GVYNCEKEAY EKYCQYAHST GFSVRKEHHH FWPNTRLIKS KDFVCSKAGF 60 KKENESGTKL KYRRSSTRTG CPAMIRFSVS KDGLWSVYKS VESHNHELAR PDDQYLLRSA 120 RSISVDNAAV LKSMTEAGIR TVDAFMYLSD EVGGVANLGF TKRDAYNHIQ KERRAKFESG 180 DTNSLIKLFK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-22 | FAR1 family protein |